DBCLS RDFs

Target datasets

• TogoWS REST API
• MEDLINE/PubMed (full)
• Kazusa Gene Indexing ( http://a.kazusa.or.jp)
• Allie  http://allie.dbcls.jp
• Databases archived at DBCLS  http://dbarchive.lifesciencedb.jp/
• Dictionaries and glossaries (digitalized) at  http://lifesciencedb.jp/lsdb.cgi?gg=dic

TogoWS REST API + RDF output powered by BioRuby

Retrieve entry in RDF/Turtle.

•  http://togows.dbcls.jp/entry/ncbi-pubmed/10975656.ttl

Search entries in RDF/Turtle.

•  http://togows.dbcls.jp/search/ncbi-pubmed/blain+cancer.ttl

MEDLINE/PubMed

RDF/TogoWS/PubMed

Kazusa Gene Indexing + PubMed + cyanobase + rhizobase

RDF/KazusaAnnotation

• SPARQL test query  http://virtuoso.beta.dbcls.jp/sparql/
• Faceted view:  http://virtuoso.beta.dbcls.jp/4store/ka/fct/

•  http://a.kazusa.or.jp
•  http://genome.kazusa.or.jp/cyanobase
•  http://genome.kazusa.or.jp/rhizobase

Allie - A Search Service for Abbreviation / Long Form

RDF/Allie

• SPARQL test query page:  http://data.allie.dbcls.jp/sparql/
• Faceted view:  http://data.allie.dbcls.jp/fct/

•  http://allie.dbcls.jp