|Version 2 (modified by ktym, 4 years ago)|
Lists currently available and still missing datasets (as Linked Data / RDF).
We should categorize followings according to their format (e.g. RDF) and relationships.
- Ensembl - genes
- OBO - GO terms, ChEBI compounds
- NCBI - genes, sequences, mesh terms, disease (omim), pubmed articles
- KEGG - pathways, genes, enzymes, compounds, drugs, glycans, reactions
- MGI - genes
- PDB - structures
- UniProt - proteins, keywords, taxonomy
- Linked Data
- Taxonomy <-> Pathway module