Version 3 (modified by alabarga, 9 years ago)

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Reflect RDFa snippets

Idea 1 (interlaced with the text):

<div xmlns:sioc="http://rdfs.org/sioc/ns#" typeof="sioc:Item">
<span class='reflect_protein'><a rel="sioc:topic" resource="http://purl.uniprot.org/uniprot/P05113"></a>IL-5</span>
</div>

Idea 2 (at the end of the document, non-redundant):

<div xmlns:sioc="http://rdfs.org/sioc/ns#" typeof="sioc:Item">
<span id='reflectEntity0'>9606.ENSP00000231454</span>
<a rel="sioc:topic" resource="http://purl.uniprot.org/uniprot/P05113"></a>
</div>

Whatizit RDFa service

IL-5 Example:  http://whatizit.neurocommons.org/index.py/text_query?pipeline=whatizitEBIMedDiseaseChemicals&query=IL-5&format=atag&max_results=10

Converted to Turtle:  http://www.w3.org/2007/08/pyRdfa/extract?uri=http://whatizit.neurocommons.org/index.py/text_query?pipeline=whatizitEBIMedDiseaseChemicals&query=IL-5&format=atag&max_results=10

This uses a W3 service ( http://www.w3.org/2007/08/pyRdfa/extract)

Uniprot RDF

 http://www.uniprot.org/uniprot/P12345.n4

uniprot:P12345
  rdf:type Protein
  alternativeName 
    rdf:type Structured_Name
    fullName "Transaminase A"
  citation <http://purl.uniprot.org/citations/4030726>
    rdf:type Journal_Citation
    title 
      "Aspartate aminotransferase isozymes from rabbit liver. Purification 
       and properties."
    author "Kuramitsu S."
    author "Inoue K."
    author "Kondo K."
    author "Aki K."
    author "Kagamiyama H."
    skos:exactMatch <http://purl.uniprot.org/medline/85289123>
    skos:exactMatch <http://purl.uniprot.org/pubmed/4030726>
    date 1985
    name "J. Biochem."
    volume 97
    pages "1337-1345"
    +rdf:type Citation_Statement
    +scope "PROTEIN SEQUENCE"
    +context 
      rdf:type Tissue
      rdfs:label "Liver"