Changes between Version 10 and Version 11 of Data_Provider_Session

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Timestamp:
2010/02/11 23:55:48 (13 years ago)
Author:
francoisbelleau
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  • Data_Provider_Session

    v10 v11  
    66The representative from the following official data provider were presents : 
    77 
    8  * DBCLS 
    9  * HAPMAP/Korean 
    10  * KEGG 
    11  * PDBj 
    12  * UniProt 
    13  * TreeBASE ([http://treebase.org v.1],[http://treebase-dev.nescent.org:6666/treebase-web v.2]) 
     8 * DBCLS [http://dbcls.rois.ac.jp/] 
     9 * DDBJ [http://www.ddbj.nig.ac.jp/] 
     10 * Korean HapMap [http://www.khapmap.org/] 
     11 * KEGG [http://www.genome.jp/] 
     12 * PDBj [http://www.pdbj.org/] 
     13 * UniProt [http://www.uniprot.org/] 
     14 * TreeBASE [http://treebase.org v.1],[http://treebase-dev.nescent.org:6666/treebase-web v.2] 
    1415 
    1516The representative from the following data integration project offering a SPARQL endpoint: 
     
    3839== Standard URIs == 
    3940 
     41 
     42{{{ 
     43Rule #1  When a data provider has given a derefencable URI to a topic, this is the only accepted URI that should be published on the [http://dig.csail.mit.edu/breadcrumbs/node/215 GGG].  Other data provider must make reference to it in their own dataset. 
     44}}} 
     45 
     46Actually the following data provider have created their own derefencable URI : 
     47 
     48 * UniProt 
     49 * Gene Ontology 
     50 
     51those providers will apply Rule #1 when they start to publish RDF. 
     52 
     53 * DBCLS 
     54 * KEGG 
     55 * PDBJ  
     56 
     57Now that data provider will share a common naming for URI, it is necessary to adopt a simple design rule for URIs. 
     58 
     59{{{ 
     60Rule #2  The syntax of a derefencable URI is as follow : 
     61            http://providerDomaineName/publicNamesapce/privateId 
     62}}} 
     63 
     64For example the folowing URI are valid : 
     65 * http://purl.uniprot.org/uniprot/P17710 
     66 * http://pdbj.org/pdbid/2yhx 
     67 * http://dbcls.jp/insc/AAB57760 
     68 * http://genome.jp/ec/2.7.1.1 
     69  
     70but not these : 
     71 
     72* http://www.genome.jp/dbget-bin/www_bget?ec:2.7.1.1 
     73 
    4074== Standard predicates == 
    4175 
     76 
     77== Tokyo Manifesto == 
     78 
     79The rules number 1, 2 and 3 constitute the Tokyo Manifesto that only data provider may endorse. 
     80 
     81