| Version 1 (modified by francoisbelleau, 15 years ago) |
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After a 1:30 hour brain storming discussion, the group take a break and get ready for the Data Provider session.
The representative from the following official data provider were presents :
* DBCLS * HAPMAP/Corean * KEGG * PDBj * UniProt?
The representative from the following data integration project offering a SPARQL endpoint:
* http://bio2rdf.org/ [SPARQL http://delicious.com/fbelleau/bio2rdf:sparql] * http://www.semantic-systems-biology.org/ [SPARQL http://www.semantic-systems-biology.org/biogateway/endpoint] * http://hcls.deri.ie/ [SPARQL http://hcls.deri.ie/sparql]
These are the objectives that were discussed :
* RAW DATA available as N-TRIPLES dump should be produced by the data provider and made available from their FTP or HTTP server * SPARQL endpoint for each dataset should be made available * Standard URIs should be used in triple * Standard predicate should be used in triple
==RAW Data dump==
UniProt? already offer raw data in RDF from his own FTP server. ftp://ftp.uniprot.org/pub/databases/uniprot/current_release/rdf/ DDBJ, PDBJ and KEEG will do the same.
==SPARQL endpoint==
There is already a certain number of SPARQL endpoints available but none are owned by the official data provider.
There is a need for an hosting service offering SPARQL endpoint in which it will be possible to load the official raw data provided by the data provider.
