Changes between Version 35 and Version 36 of OpenBio

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Timestamp:
2010/02/12 13:35:31 (13 years ago)
Author:
bonnal
Comment:

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  • OpenBio

    v35 v36  
    106106 
    107107Suggested endpoint to play with: 
    108  
     108  * [http://kegg.bio2rdf.org/sparql Kegg on Bio2Rdf] 
     109  * [http://geneid.bio2rdf.org/sparql Gene on Bio2Rdf] 
    109110  * [http://www.semantic-systems-biology.org/biogateway/endpoint BioGateway endpoint] 
    110111  * More info at: [http://www.semantic-systems-biology.org/biogateway/querying Semantic Systems Biology] 
     
    116117     * Initial: http://chapmanb.posterous.com/biohackathon-2010-day-2-python-sparql-query-b 
    117118  * Initial python query client for InterMine: http://chapmanb.posterous.com/biohackathon-2010-day-3-fish-interoperating-a 
     119  * Ruby SPARQL client: 
     120    * [http://activerdf.org/ ActiveRDF] this is the original package, but it seems to be bugged with our endpoints. Two possible solutions: 
     121       * grab [http://github.com/net7/active_rdf_talia this] fork from github 
     122       * apply this patch the file /var/lib/gems/1.8/gems/activerdf_sparql-1.3.6/lib/activerdf_sparql/sparql.rb (path depends on you configuration) 
     123    * BioGateway ... 
     124    * Bio2RDF  
    118125 
    119126Todo: