Changes between Version 35 and Version 36 of OpenBio
- Timestamp:
- 2010/02/12 13:35:31 (15 years ago)
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OpenBio
v35 v36 106 106 107 107 Suggested endpoint to play with: 108 108 * [http://kegg.bio2rdf.org/sparql Kegg on Bio2Rdf] 109 * [http://geneid.bio2rdf.org/sparql Gene on Bio2Rdf] 109 110 * [http://www.semantic-systems-biology.org/biogateway/endpoint BioGateway endpoint] 110 111 * More info at: [http://www.semantic-systems-biology.org/biogateway/querying Semantic Systems Biology] … … 116 117 * Initial: http://chapmanb.posterous.com/biohackathon-2010-day-2-python-sparql-query-b 117 118 * Initial python query client for InterMine: http://chapmanb.posterous.com/biohackathon-2010-day-3-fish-interoperating-a 119 * Ruby SPARQL client: 120 * [http://activerdf.org/ ActiveRDF] this is the original package, but it seems to be bugged with our endpoints. Two possible solutions: 121 * grab [http://github.com/net7/active_rdf_talia this] fork from github 122 * apply this patch the file /var/lib/gems/1.8/gems/activerdf_sparql-1.3.6/lib/activerdf_sparql/sparql.rb (path depends on you configuration) 123 * BioGateway ... 124 * Bio2RDF 118 125 119 126 Todo: