Changes between Version 1 and Version 2 of Queries

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Timestamp:
2009/11/06 13:57:03 (15 years ago)
Author:
ktym
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  • Queries

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    3333 * Q: I have a set of predicted genes from a newly sequenced genome of a Theileria species. What is a unique characteristic of this set from the view point of the biological pathway? Is it natural that this organism lacks thiolase in the mevalonate pathway? (Toshiaki Katayama) 
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     35To resolve this sample question, we need taxonomically classified list of biological modules in the pathway filled with a phylogenetic profile of orthologous genes among related species. Then we can confirm its absence with protein2genome mapping, predicted sub cellular localization of the enzyme, knowledge on reaction in the organelle (apicoplast) from related journal articles and reviews. Most of components are already in databases but none of them are semantically linked with each other. 
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