Changes between Version 6 and Version 7 of Queries
- Timestamp:
- 2009/12/18 02:29:52 (15 years ago)
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Queries
v6 v7 3 3 Targeted queries to be resolved by Semantic Web technologies. 4 4 5 One of our goal would be to implement an advanced search engine -- something like a Wolfram Alpha for biology. In this page, we will gather meaningful and challenging queries for the Semantic Web technology and will define some goals of the BioHackathon 2010 from them.5 One of our goal would be to implement an advanced search engine -- something like a Wolfram Alpha for biology. In this page, we will gather meaningful and challenging queries for the Semantic Web technology and will define some goals of the !BioHackathon 2010 from them. 6 6 7 7 === Expected query types === … … 37 37 === From [http://www.flymine.org/release-20.0/templates.do FlyMine Templates] === 38 38 39 InterMine/FlyMine provides a curated set of typical query templates. As these are checked by the biologists, most of them seems to be meaningful compared to computationally generated queries based on combinations of available resources.39 !InterMine/FlyMine provides a curated set of typical query templates. As these are checked by the biologists, most of them seems to be meaningful compared to computationally generated queries based on combinations of available resources. 40 40 41 41 * Disease [Human] --> Genes + D. melanogaster homologues (filter on BLAST E-Value). … … 43 43 44 44 * EST clone [A. gambiae] --> Chromosomal location + Gene + D. melanogaster orthologue + Pathway. 45 * For a particular A. gambiae EST clone, show its chromosomal location, the corresponding A. gambiae gene, the D. melanogaster orthologue and the pathway. (Data Source: VectorBase, InParanoid, KEGG, Reactome,FlyReactome).45 * For a particular A. gambiae EST clone, show its chromosomal location, the corresponding A. gambiae gene, the D. melanogaster orthologue and the pathway. (Data Source: !VectorBase, !InParanoid, KEGG, Reactome, !FlyReactome). 46 46 47 47