= Group activities = * TextMiningDayOne * TextMiningDayTwo === Available datasets === [http://esw.w3.org/topic/HCLSIG/LODD/Data LODD-related datasets that the LODD group already made available as Linked Data] [http://www.freebase.com/view/user/bio2rdf/public/sparql SPARQL endpoint provided by Bio2RDF] Example URI of a linked data representation of a Stitch compound: [http://www4.wiwiss.fu-berlin.de/stitch/resource/chemicals/1] and a protein: [http://www4.wiwiss.fu-berlin.de/stitch/resource/proteins/100018] === Available text mining webservices === [http://reflect.cbs.dtu.dk/status.html Reflect] [http://www.ebi.ac.uk/webservices/whatizit Whatizit] [http://www-tsujii.is.s.u-tokyo.ac.jp/medie/ Medie] === Modifications to the Reflect service === * Add RDFa to HTML result format --> DONE * Add a new function called "getRDF" * Use STITCH URIs to identify Chemicals --> As for proteins, linking is made using [http://www4.wiwiss.fu-berlin.de/stitch/ http://www4.wiwiss.fu-berlin.de/stitch/] === Ideas for MEDIE === * An example MEDIE result: [http://www-tsujii.is.s.u-tokyo.ac.jp/medie/search.cgi?search_type=semantic_search&verb=activate&object=p53&base_form=verb&ontology=verb] * results are also available as XML that we could transform, but we currently do not know how they identify PubMed abstracts in their REST URIs * REST URL to get a result in xml: [http://www-tsujii.is.s.u-tokyo.ac.jp/medie/dbcls.cgi?subject=p53&verb=activate&sm=1] * Attention, please cite [http://www-tsujii.is.s.u-tokyo.ac.jp/medie/ MEDIE] if you use this REST API. * Three results are obtained by default. * Details are to be announced.