Use case

We performed this query to Pubmed and retrieved 200 pmids.

The abstracts were annotated using Whatizit, Reflect and Medie.

and the results converted to RDF using the following convention:

The results are available as RDF here: Whatizit.RDF Reflect.RDf and Medie.RDF.

Pubmed information in RDF format was retrieved for all abstracts using TogoWS, together with Uniprot RDF for the annotated proteins.

Some relevant links

•  http://bioportal.bioontology.org/
•  Texai project download page Useful RDF for expressing English (including lexicon, grammars)